Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01020 | Not Available | Negative | 1026340 - 1027099 | 29383.0 |
| hypothetical protein | BACCOPRO_01021 | Not Available | Positive | 1027275 - 1027487 | 7810.42 |
| hypothetical protein | BACCOPRO_01022 | Not Available | Positive | 1027603 - 1028742 | 43701.9 |
| hypothetical protein | BACCOPRO_01023 | Not Available | Negative | 1028834 - 1028965 | 5008.46 |
| hypothetical protein | BACCOPRO_01024 | Not Available | Positive | 1029042 - 1029317 | 9821.42 |
| hypothetical protein | BACCOPRO_01025 | Not Available | Positive | 1029367 - 1030383 | 38616.3 |
| hypothetical protein | BACCOPRO_01026 | Not Available | Positive | 1030426 - 1030560 | 4888.0 |
| hypothetical protein | BACCOPRO_01027 | Not Available | Positive | 1030570 - 1031586 | 37883.7 |
| hypothetical protein | BACCOPRO_01028 | Not Available | Negative | 1031660 - 1032491 | 32471.1 |
| hypothetical protein | BACCOPRO_01029 | Not Available | Positive | 1032607 - 1032825 | 7912.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


