Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_01010 | Not Available | Negative | 1013528 - 1014811 | 47047.3 |
| pantothenate kinase, type iii | BACCOPRO_01011 | Not Available | Negative | 1014801 - 1015580 | 29147.5 |
| hypothetical protein | BACCOPRO_01012 | Not Available | Positive | 1015673 - 1016860 | 45559.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase | BACCOPRO_01013 | Not Available | Positive | 1016857 - 1018440 | 59474.6 |
| preprotein translocase, seca subunit | BACCOPRO_01014 | Not Available | Positive | 1018544 - 1021849 | 125334.0 |
| hypothetical protein | BACCOPRO_01015 | Not Available | Positive | 1022009 - 1023004 | 36693.7 |
| hypothetical protein | BACCOPRO_01016 | Not Available | Positive | 1023069 - 1023518 | 16960.0 |
| hypothetical protein | BACCOPRO_01017 | Not Available | Positive | 1023531 - 1024529 | 38446.3 |
| hypothetical protein | BACCOPRO_01018 | Not Available | Negative | 1024590 - 1024793 | 8160.97 |
| hypothetical protein | BACCOPRO_01019 | Not Available | Positive | 1025177 - 1026256 | 39752.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


