Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | BACCOPRO_01000 | Not Available | Positive | 998483 - 999967 | 56382.6 |
| pyruvate synthase | BACCOPRO_01001 | Not Available | Negative | 1000064 - 1003615 | 129395.0 |
| hypothetical protein | BACCOPRO_01002 | Not Available | Negative | 1003655 - 1004764 | 42815.1 |
| hypothetical protein | BACCOPRO_01004 | Not Available | Negative | 1004764 - 1005069 | 12006.1 |
| hypothetical protein | BACCOPRO_01003 | Not Available | Positive | 1005060 - 1006238 | 43811.5 |
| peptidase, s41 family | BACCOPRO_01005 | Not Available | Negative | 1006324 - 1007823 | 55008.2 |
| hypothetical protein | BACCOPRO_01006 | Not Available | Negative | 1007991 - 1010126 | 79116.5 |
| hypothetical protein | BACCOPRO_01007 | Not Available | Negative | 1010224 - 1011480 | 47455.9 |
| hypothetical protein | BACCOPRO_01008 | Not Available | Negative | 1011488 - 1012114 | 24089.5 |
| tetratricopeptide repeat protein | BACCOPRO_01009 | Not Available | Negative | 1012120 - 1013481 | 50548.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


