Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | DSM 18228 = JCM 13818 strain DSM 18228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028335 bp
Thymine Count
1064266 bp
Guanine Count
898775 bp
Cytosine Count
864067 bp
Genome Length
3855443 bp
Protein-coding Genes
3838 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACCOPRO_00087 | Not Available | Positive | 92063 - 92455 | 14934.8 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACCOPRO_00088 | Not Available | Positive | 92498 - 95005 | 93741.0 |
| hypothetical protein | BACCOPRO_00089 | Not Available | Negative | 95101 - 96096 | 37289.4 |
| hypothetical protein | BACCOPRO_00090 | Not Available | Negative | 96229 - 96380 | 5679.13 |
| hypothetical protein | BACCOPRO_00091 | Not Available | Negative | 96396 - 97298 | 34878.8 |
| hypothetical protein | BACCOPRO_00092 | Not Available | Negative | 97483 - 97695 | 7754.17 |
| hypothetical protein | BACCOPRO_00093 | Not Available | Negative | 97778 - 98824 | 40214.9 |
| hypothetical protein | BACCOPRO_00094 | Not Available | Negative | 98892 - 99146 | 8900.42 |
| hypothetical protein | BACCOPRO_00095 | Not Available | Negative | 99258 - 99386 | 5083.08 |
| hypothetical protein | BACCOPRO_00096 | Not Available | Positive | 99454 - 100368 | 34625.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


