Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | ASF92_04760 | C6BYB7 | Positive | 1043180 - 1044760 | 58567.3 |
| delta-aminolevulinic acid dehydratase | ASF92_04765 | P30950 | Positive | 1044893 - 1045861 | 36039.4 |
| glutamate-1-semialdehyde aminotransferase | ASF92_04770 | Q7MHY9 | Positive | 1046023 - 1047393 | 49935.0 |
| histidine kinase | ASF92_04775 | P23545 | Positive | 1047750 - 1048616 | 32660.0 |
| two-component system response regulator | ASF92_04780 | P13792 | Positive | 1048625 - 1049329 | 27294.2 |
| hypothetical protein | ASF92_04785 | Not Available | Positive | 1049329 - 1049844 | 19905.5 |
| uroporphyrinogen decarboxylase | ASF92_04790 | Q6MB12 | Positive | 1050057 - 1051082 | 38155.3 |
| hypothetical protein | ASF92_04795 | Not Available | Positive | 1051173 - 1051352 | 6934.37 |
| hypothetical protein | ASF92_04800 | Not Available | Positive | 1051340 - 1051627 | 11075.4 |
| protoporphyrinogen ix oxidase | ASF92_04805 | P72793 | Positive | 1051642 - 1052202 | 21581.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

