Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | ASF92_04710 | Q8CN40 | Positive | 1031460 - 1032149 | 25283.4 |
| hypothetical protein | ASF92_04715 | Not Available | Positive | 1032158 - 1032844 | 25606.6 |
| hypothetical protein | ASF92_04720 | Not Available | Positive | 1032849 - 1033826 | 36323.2 |
| hypothetical protein | ASF92_04725 | Not Available | Positive | 1033888 - 1034496 | 22871.2 |
| hypothetical protein | ASF92_04730 | Not Available | Positive | 1034559 - 1035926 | 50735.1 |
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | ASF92_04735 | A6LGR5 | Positive | 1036023 - 1038020 | 73895.2 |
| mechanosensitive ion channel protein mscs | ASF92_04740 | P0AAT4 | Positive | 1038269 - 1039543 | 48618.3 |
| hydrolase | ASF92_04745 | Not Available | Negative | 1039714 - 1040538 | 30613.3 |
| doxx family protein | ASF92_04750 | Not Available | Negative | 1040958 - 1041359 | 15373.6 |
| serine carboxypeptidase | ASF92_04755 | B8FLI1 | Positive | 1041464 - 1042690 | 46663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

