Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASF92_04410 | A0A0H3GM48 | Negative | 970564 - 971355 | 29846.1 |
| dihydropteroate synthase | ASF92_04415 | P0AC14 | Negative | 971445 - 972311 | 32142.0 |
| hypothetical protein | ASF92_04420 | Not Available | Positive | 972410 - 972958 | 20910.3 |
| doxx family protein | ASF92_04425 | Not Available | Positive | 972955 - 974106 | 43195.1 |
| abc transporter permease | ASF92_04430 | P94311 | Positive | 974107 - 975162 | 38970.6 |
| shikimate kinase | ASF92_04435 | Q8A2B2 | Positive | 975219 - 975725 | 19444.4 |
| phytoene dehydrogenase | ASF92_04440 | L7WC64 | Negative | 975771 - 977234 | 55593.6 |
| peptidase m28 | ASF92_04445 | Not Available | Negative | 977249 - 978952 | 63416.8 |
| phenylalanyl-trna synthetase subunit alpha | ASF92_04450 | Not Available | Positive | 979196 - 979306 | 4370.13 |
| rna methyltransferase | ASF92_04455 | Q8AA22 | Positive | 979463 - 980884 | 53959.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

