Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase subunit e1 | ASF92_03345 | Q59106 | Positive | 739653 - 742451 | 105073.0 |
| 2-oxoglutarate dehydrogenase | ASF92_03350 | P0AFG7 | Positive | 742571 - 743806 | 43539.6 |
| hypothetical protein | ASF92_03355 | Not Available | Positive | 743980 - 744339 | 14007.7 |
| gtpase rsga | ASF92_03360 | Q64YJ1 | Positive | 744577 - 745497 | 34342.3 |
| d-tyrosyl-trna(tyr) deacylase | ASF92_03365 | A5FMN0 | Positive | 745639 - 746091 | 16477.1 |
| glycosyl transferase | ASF92_03370 | Not Available | Positive | 746091 - 747629 | 59775.4 |
| pyrophosphatase | ASF92_03375 | P42979 | Positive | 747619 - 747948 | 12473.9 |
| hypothetical protein | ASF92_03380 | Not Available | Negative | 748008 - 748319 | 12069.5 |
| hypothetical protein | ASF92_03385 | Not Available | Positive | 748611 - 748892 | 10982.4 |
| hypothetical protein | ASF92_03390 | Not Available | Negative | 748889 - 750712 | 69900.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

