Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-recycling factor | ASF92_02425 | A5FMF6 | Negative | 546826 - 547389 | 20665.0 |
| uridylate kinase | ASF92_02430 | Q11XK2 | Negative | 547428 - 548132 | 25900.7 |
| n-acetylglucosamine-6-phosphate deacetylase | ASF92_02435 | O32445 | Negative | 548197 - 549291 | 40119.3 |
| elongation factor ts | ASF92_02440 | Q11QN7 | Negative | 549399 - 550244 | 29748.5 |
| 30s ribosomal protein s2 | ASF92_02445 | Q11QN6 | Negative | 550354 - 551214 | 31799.6 |
| 30s ribosomal protein s9 | ASF92_02450 | Q11QN5 | Negative | 551233 - 551619 | 14191.4 |
| 50s ribosomal protein l13 | ASF92_02455 | Q14KZ8 | Negative | 551623 - 552066 | 16403.1 |
| dna-binding protein | ASF92_02460 | Not Available | Negative | 552479 - 553018 | 21084.8 |
| mechanosensitive ion channel protein mscs | ASF92_02465 | Not Available | Positive | 553140 - 554219 | 41591.1 |
| rna-binding transcriptional accessory protein | ASF92_02470 | P71353 | Negative | 554293 - 556584 | 84956.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

