Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | ASF92_02325 | B2RJH1 | Positive | 516931 - 517365 | 15657.9 |
| hypothetical protein | ASF92_02330 | Not Available | Positive | 517433 - 519127 | 63846.0 |
| hypothetical protein | ASF92_02335 | Not Available | Positive | 519105 - 519899 | 29423.7 |
| peptidase m23 | ASF92_02340 | Not Available | Positive | 520038 - 521336 | 48703.2 |
| twin-arginine translocation protein, tata/e family subunit | ASF92_02345 | B3EMS7 | Positive | 521382 - 521744 | 13085.5 |
| preprotein translocase | ASF92_02350 | A6H2G3 | Positive | 521779 - 521955 | 6222.76 |
| glutamyl-trna amidotransferase | ASF92_02355 | B3QYQ7 | Positive | 521974 - 523392 | 51667.7 |
| lytic transglycosylase | ASF92_02360 | Not Available | Positive | 523491 - 524894 | 52456.7 |
| malic enzyme | ASF92_02365 | P76558 | Positive | 525054 - 527378 | 84843.3 |
| atp-dependent dna helicase ruva | ASF92_02370 | Q11Z44 | Positive | 527427 - 528011 | 21505.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

