Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | ASF92_02220 | A5FEF4 | Positive | 496189 - 497460 | 45892.5 |
| hypothetical protein | ASF92_02225 | Not Available | Negative | 497763 - 499133 | 50101.6 |
| amidophosphoribosyltransferase | ASF92_02230 | Q8FCT3 | Negative | 499152 - 499871 | 27106.9 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | ASF92_02235 | Q11QF0 | Negative | 499985 - 501046 | 39702.5 |
| addiction module toxin yoeb | ASF92_02240 | Q8FG53 | Negative | 501048 - 501329 | 10805.2 |
| hypothetical protein | ASF92_02245 | Not Available | Negative | 501305 - 501508 | 7513.23 |
| 23s rrna pseudouridine synthase f | ASF92_02250 | Q8ZKL1 | Negative | 501623 - 502597 | 36072.2 |
| damage-inducible protein dinb | ASF92_02255 | Not Available | Negative | 502924 - 503421 | 18815.4 |
| dna-binding transcriptional regulator | ASF92_02260 | Not Available | Negative | 503694 - 504383 | 26710.5 |
| histidine kinase | ASF92_02265 | P54302 | Positive | 504631 - 507102 | 94190.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

