Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASF92_01970 | Not Available | Positive | 439110 - 439625 | 19430.6 |
| atp-dependent exodnase (exonuclease v) alpha subunit - helicase superfamily i member | ASF92_01975 | Not Available | Positive | 439711 - 440484 | 29453.4 |
| hypothetical protein | ASF92_01980 | Not Available | Positive | 440487 - 441050 | 21336.6 |
| hypothetical protein | ASF92_01985 | Not Available | Negative | 441112 - 441759 | 24429.7 |
| hypothetical protein | ASF92_01990 | Not Available | Positive | 441868 - 443004 | 44583.3 |
| dtdp-glucose 4,6-dehydratase | ASF92_01995 | P37777 | Positive | 443219 - 444271 | 39901.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ASF92_02000 | P37780 | Positive | 444271 - 444813 | 20231.0 |
| nad(p)-dependent oxidoreductase | ASF92_02005 | O66251 | Positive | 444815 - 445672 | 31368.2 |
| glucose-1-phosphate thymidylyltransferase | ASF92_02010 | P95778 | Positive | 445818 - 446678 | 31287.9 |
| hypothetical protein | ASF92_02015 | Not Available | Positive | 447315 - 447950 | 23270.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

