Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | ASF92_00160 | Q8D4U6 | Negative | 33477 - 34220 | 27876.9 |
| hypothetical protein | ASF92_00165 | Q8E7H4 | Negative | 34222 - 35820 | 60122.6 |
| fumarate hydratase | ASF92_00170 | Q9CMK1 | Positive | 36313 - 37710 | 49574.7 |
| fumarate hydratase | ASF92_00175 | Not Available | Positive | 37848 - 38360 | 19639.7 |
| s1/p1 nuclease | ASF92_00180 | Q8LDW6 | Positive | 38362 - 39168 | 30670.1 |
| hypothetical protein | ASF92_00185 | Not Available | Positive | 39463 - 39897 | 16023.0 |
| protein tyrosine phosphatase | ASF92_00190 | Q55535 | Positive | 40106 - 40540 | 16478.8 |
| crp/fnr family transcriptional regulator | ASF92_00195 | Not Available | Positive | 40580 - 41323 | 27992.4 |
| hypothetical protein | ASF92_00200 | Not Available | Negative | 41364 - 42038 | 25861.1 |
| aldehyde dehydrogenase | ASF92_00205 | Not Available | Positive | 42323 - 42778 | 17074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

