Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-pyruvoyl tetrahydrobiopterin synthase | ASF92_01370 | Q5REZ5 | Positive | 301798 - 302208 | 15615.4 |
| gtp cyclohydrolase i | ASF92_01375 | B2RIJ1 | Positive | 302215 - 302847 | 23829.8 |
| acp s-malonyltransferase | ASF92_01380 | P71019 | Positive | 302932 - 303813 | 31277.9 |
| atpase | ASF92_01385 | Q1RJB3 | Positive | 303902 - 307630 | 142796.0 |
| hypothetical protein | ASF92_01390 | Not Available | Negative | 307632 - 308534 | 34210.8 |
| glycoside hydrolase | ASF92_01395 | O35015 | Positive | 308740 - 310284 | 59182.4 |
| n-acetylglucosamine transporter | ASF92_01400 | Q3UDW8 | Negative | 310285 - 311427 | 42698.2 |
| glucosamine-6-phosphate deaminase | ASF92_01405 | Q8AB53 | Negative | 311998 - 313923 | 72408.1 |
| anhydro-n-acetylmuramic acid kinase | ASF92_01410 | Q15RS7 | Positive | 314070 - 315266 | 43565.2 |
| susc/raga family tonb-linked outer membrane protein | ASF92_01415 | Not Available | Positive | 315382 - 318471 | 111707.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

