Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase v | ASF92_00770 | Q9I4U3 | Positive | 173300 - 174685 | 52537.9 |
| hypothetical protein | ASF92_00775 | Not Available | Negative | 174797 - 175126 | 12117.2 |
| hypothetical protein | ASF92_00780 | Not Available | Negative | 175119 - 175478 | 13462.1 |
| thiamine-monophosphate kinase | ASF92_00785 | O05514 | Negative | 175488 - 176528 | 38259.6 |
| sodium:proton antiporter | ASF92_00790 | A0KMZ3 | Negative | 176667 - 177905 | 44193.2 |
| quinolinate synthetase | ASF92_00795 | B0JLU4 | Negative | 177973 - 178971 | 37053.1 |
| l-aspartate oxidase | ASF92_00800 | Q9KPA4 | Positive | 179421 - 181007 | 59481.9 |
| acetyltransferase | ASF92_00805 | Q9C6B3 | Positive | 181071 - 181586 | 18440.2 |
| hypothetical protein | ASF92_00810 | Not Available | Negative | 181587 - 183233 | 61889.6 |
| trna uridine 5-carboxymethylaminomethyl modification protein | ASF92_00815 | Q11PC8 | Negative | 183355 - 185217 | 69029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

