Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | ASF92_00715 | Not Available | Negative | 160293 - 162995 | 100283.0 |
| acyl-coa thioesterase | ASF92_00725 | O66120 | Positive | 165996 - 166382 | 14490.5 |
| phosphatidate cytidylyltransferase | ASF92_00730 | Q5HGH0 | Negative | 166384 - 167193 | 30437.8 |
| hypothetical protein | ASF92_00735 | Not Available | Negative | 167242 - 167448 | 7615.09 |
| peptidase | ASF92_00740 | Not Available | Negative | 167429 - 168355 | 34768.6 |
| nitrogen fixation protein nifr | ASF92_00745 | Q92JQ6 | Positive | 168399 - 169406 | 37870.5 |
| co2+/mg2+ efflux protein apag | ASF92_00750 | B8JAJ1 | Positive | 169442 - 169828 | 14594.3 |
| hypothetical protein | ASF92_00755 | Not Available | Negative | 170390 - 171085 | 25539.3 |
| fad-dependent oxidoreductase | ASF92_00760 | Not Available | Positive | 171172 - 172305 | 42238.2 |
| formyltetrahydrofolate deformylase | ASF92_00765 | Q03432 | Negative | 172314 - 173153 | 31461.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

