Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen fixation protein nifu | ASF92_00565 | O32119 | Negative | 131996 - 132241 | 8723.67 |
| atp-binding protein | ASF92_00570 | P53383 | Negative | 132276 - 133352 | 38390.5 |
| penicillin-binding protein | ASF92_00575 | O24849 | Positive | 133484 - 135640 | 80185.8 |
| hypoxanthine phosphoribosyltransferase | ASF92_00580 | P37472 | Positive | 135760 - 136302 | 20288.7 |
| phosphatidylserine decarboxylase | ASF92_00585 | Q11Y69 | Positive | 136356 - 137015 | 25034.3 |
| mechanosensitive ion channel protein mscs | ASF92_00590 | O66994 | Negative | 137126 - 138304 | 44257.1 |
| 50s ribosomal protein l19 | ASF92_00595 | A6LEF2 | Negative | 138392 - 138739 | 13019.9 |
| trna (guanine-n1)-methyltransferase | ASF92_00600 | A5FHV7 | Negative | 138876 - 139550 | 24943.8 |
| 16s rrna processing protein rimm | ASF92_00605 | Q8A682 | Negative | 139565 - 140092 | 20208.9 |
| 30s ribosomal protein s16 | ASF92_00610 | A5FKD9 | Negative | 140274 - 140843 | 20252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

