Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf176 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1464836 bp
Thymine Count
1464126 bp
Guanine Count
912928 bp
Cytosine Count
911696 bp
Genome Length
4753721 bp
Protein-coding Genes
4054 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASF92_00010 | Not Available | - | 1289 - 2467 | 44329.1 |
| hypothetical protein | ASF92_00015 | Not Available | + | 2644 - 3711 | 41876.8 |
| lyttr family transcriptional regulator | ASF92_00020 | P94514 | + | 3708 - 4391 | 26356.3 |
| hypothetical protein | ASF92_00025 | Not Available | + | 4723 - 5334 | 21699.1 |
| alpha-l-arabinofuranosidase | ASF92_00030 | Not Available | + | 5551 - 8142 | 97073.0 |
| abc transporter permease | ASF92_00035 | Q68XW4 | + | 8325 - 9131 | 29000.5 |
| abc transporter atp-binding protein | ASF92_00040 | Not Available | + | 9135 - 9914 | 28841.8 |
| abc transporter permease | ASF92_00045 | Not Available | + | 9917 - 10888 | 35185.8 |
| hypothetical protein | ASF92_00050 | Not Available | - | 11002 - 11223 | 8366.1 |
| alpha-ketoglutarate transporter | ASF92_00055 | P0AEX3 | + | 11676 - 12983 | 48175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.