Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m1 | ASE74_15245 | Not Available | Positive | 926015 - 927685 | 63690.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ASE74_15250 | B1YJ39 | Positive | 928962 - 929879 | 33417.7 |
| 2,5-dioxovalerate dehydrogenase | ASE74_15255 | Q08IC0 | Positive | 929894 - 931480 | 56146.6 |
| hydroxyproline-2-epimerase | ASE74_15260 | D2QN44 | Positive | 931473 - 932474 | 36649.9 |
| amino acid dehydrogenase | ASE74_15265 | A1KRK7 | Positive | 932489 - 933730 | 45389.3 |
| hypothetical protein | ASE74_15270 | Not Available | Negative | 934511 - 934786 | 10251.7 |
| hypothetical protein | ASE74_15275 | Not Available | Negative | 934788 - 935462 | 25574.6 |
| arac family transcriptional regulator | ASE74_15280 | Not Available | Positive | 936112 - 937014 | 33770.3 |
| x-pro dipeptidyl-peptidase | ASE74_15285 | Not Available | Positive | 937102 - 938883 | 68677.6 |
| amino acid transporter | ASE74_15290 | Q9UM01 | Positive | 938925 - 940367 | 52160.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

