Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | ASE74_00295 | A6GWS0 | Negative | 62617 - 63381 | 27108.0 |
| thiamine-phosphate synthase | ASE74_00300 | A5FJJ1 | Negative | 63392 - 64027 | 22937.9 |
| hypothetical protein | ASE74_00305 | Not Available | Negative | 64038 - 64640 | 22619.2 |
| thiamine biosynthesis protein thic | ASE74_00310 | Q88DA5 | Negative | 64647 - 66530 | 70012.5 |
| thiamine biosynthesis protein this | ASE74_00315 | Not Available | Negative | 66614 - 66817 | 7209.71 |
| serine protease | ASE74_00320 | Not Available | Negative | 67279 - 68949 | 60645.9 |
| protein kinase | ASE74_00325 | Not Available | Positive | 69281 - 70582 | 47498.5 |
| hypothetical protein | ASE74_00330 | Not Available | Negative | 70670 - 71332 | 25186.2 |
| crp/fnr family transcriptional regulator | ASE74_00335 | Not Available | Positive | 71513 - 72079 | 21932.1 |
| aldose epimerase | ASE74_00340 | Not Available | Negative | 72591 - 73457 | 33288.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

