Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme transporter ccmd | ASE74_13035 | P98053 | Negative | 414772 - 416004 | 46129.4 |
| quinol:cytochrome c oxidoreductase | ASE74_13040 | Not Available | Negative | 416074 - 417297 | 46364.9 |
| cytochrome c | ASE74_13045 | Not Available | Negative | 417314 - 417919 | 22118.2 |
| quinol:cytochrome c oxidoreductase | ASE74_13050 | Not Available | Negative | 417891 - 418427 | 20014.4 |
| hydrogenase | ASE74_13055 | Not Available | Negative | 418430 - 419902 | 55839.2 |
| molybdopterin oxidoreductase | ASE74_13060 | Q72E85 | Negative | 419929 - 422964 | 110994.0 |
| cytochrome c | ASE74_13065 | Not Available | Negative | 423013 - 424317 | 47930.3 |
| deoxyhypusine synthase | ASE74_13070 | Not Available | Negative | 424573 - 425553 | 36862.1 |
| polymerase | ASE74_13075 | Not Available | Positive | 426063 - 427193 | 42514.5 |
| hypothetical protein | ASE74_13080 | Not Available | Negative | 427313 - 429745 | 92273.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

