Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 316505 - 316582 | Not Available |
| dna repair protein reco | ASE74_12685 | Q5LIK3 | Negative | 316677 - 317402 | 28062.3 |
| fis family transcriptional regulator | ASE74_12690 | Not Available | Positive | 317524 - 319875 | 87199.5 |
| isoleucine--trna ligase | ASE74_12700 | Q5LCU8 | Positive | 320743 - 324144 | 129539.0 |
| molecular chaperone dnak | ASE74_12705 | Not Available | Positive | 324175 - 324558 | 14411.0 |
| peptidase a8 | ASE74_12710 | B2RI39 | Positive | 324558 - 325160 | 22871.1 |
| diadenosine tetraphosphate hydrolase | ASE74_12715 | Not Available | Positive | 325446 - 325964 | 19725.9 |
| hypothetical protein | ASE74_12720 | Not Available | Positive | 326172 - 326852 | 25225.6 |
| 2-oxoglutarate dehydrogenase | ASE74_12725 | P0AFG7 | Negative | 327061 - 328290 | 43470.6 |
| 2-oxoglutarate dehydrogenase subunit e1 | ASE74_12730 | Q59106 | Negative | 328368 - 331163 | 105209.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

