Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane rhomboid family protein | ASE74_12530 | Not Available | Positive | 274753 - 275607 | 31469.2 |
| endonuclease | ASE74_12535 | Not Available | Positive | 275607 - 276719 | 42155.6 |
| hypothetical protein | ASE74_12540 | Not Available | Negative | 277101 - 277292 | 6914.36 |
| nad(p)h-dependent oxidoreductase | ASE74_12545 | Q4L920 | Positive | 277867 - 278499 | 23175.0 |
| hypothetical protein | ASE74_12550 | Not Available | Positive | 278914 - 281640 | 100168.0 |
| d-glycerate dehydrogenase | ASE74_12555 | Q9C4M5 | Negative | 282152 - 283108 | 34785.1 |
| hypothetical protein | ASE74_12560 | Not Available | Negative | 283170 - 283979 | 30221.7 |
| collagen-binding protein | ASE74_12565 | Not Available | Negative | 283984 - 286308 | 86795.1 |
| hypothetical protein | ASE74_12570 | Not Available | Negative | 286406 - 287530 | 41835.7 |
| glycosyl hydrolase family 5 | ASE74_12575 | W8QRE4 | Negative | 287616 - 289367 | 66330.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

