Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate oxidoreductase | ASE74_00645 | Q97L67 | Negative | 146355 - 147866 | 56405.5 |
| pectate lyase | ASE74_00650 | Not Available | Negative | 147981 - 149012 | 38602.4 |
| glucuronyl hydrolase | ASE74_00655 | Not Available | Negative | 149267 - 151198 | 71652.7 |
| glycoside hydrolase | ASE74_00660 | P27644 | Negative | 151204 - 152874 | 60220.7 |
| pectin esterase | ASE74_00665 | Q9LVQ0 | Negative | 153034 - 153990 | 35646.1 |
| glycoside hydrolase | ASE74_00670 | Q9WXE8 | Positive | 154349 - 155989 | 61224.6 |
| gdsl family lipase | ASE74_00675 | Not Available | Positive | 155994 - 156779 | 29636.8 |
| hypothetical protein | ASE74_00680 | P96684 | Negative | 157050 - 157484 | 16215.7 |
| cyclic nucleotide-binding protein | ASE74_00685 | Not Available | Negative | 157913 - 158485 | 22813.4 |
| hypothetical protein | ASE74_00690 | Not Available | Negative | 158539 - 159321 | 29156.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

