Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASE74_00545 | Not Available | Positive | 119638 - 119889 | 9605.05 |
| pseudouridine synthase | ASE74_00550 | A4SML8 | Negative | 120021 - 121205 | 43928.5 |
| laci family transcriptional regulator | ASE74_00555 | Not Available | Negative | 121317 - 122327 | 37810.4 |
| susc/raga family tonb-linked outer membrane protein | ASE74_00560 | Not Available | Positive | 122593 - 125823 | 117879.0 |
| carbohydrate-binding protein susd | ASE74_00565 | Not Available | Positive | 125841 - 127685 | 67736.8 |
| hypothetical protein | ASE74_00570 | Not Available | Positive | 127696 - 129342 | 57293.8 |
| pectin esterase | ASE74_00575 | Q8L7Q7 | Positive | 129431 - 130435 | 37231.5 |
| gntr family transcriptional regulator | ASE74_00580 | O31523 | Positive | 130455 - 131189 | 27173.9 |
| cell division protein | ASE74_00585 | Not Available | Negative | 131217 - 131696 | 18278.7 |
| nad-dependent epimerase | ASE74_00590 | Not Available | Negative | 131709 - 132638 | 34060.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

