Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | AQ505_RS00405 | Not Available | Negative | 120239 - 121174 | 36033.0 |
| trna dihydrouridine synthase dusb | AQ505_RS00410 | Not Available | Positive | 121228 - 122235 | 38005.0 |
| co2+/mg2+ efflux protein apag | AQ505_RS00415 | Not Available | Positive | 122270 - 122656 | 14644.3 |
| zinc metallopeptidase | AQ505_RS00420 | Not Available | Negative | 122672 - 123367 | 25763.5 |
| dna recombination protein rmuc | AQ505_RS00425 | Not Available | Positive | 123528 - 124850 | 50222.4 |
| thiamine-phosphate kinase | AQ505_RS00430 | Not Available | Negative | 124845 - 125885 | 38305.0 |
| quinolinate synthase nada | AQ505_RS00435 | Not Available | Negative | 125977 - 126969 | 36691.3 |
| l-aspartate oxidase | AQ505_RS00440 | Not Available | Positive | 127370 - 128956 | 59158.6 |
| gamma carbonic anhydrase family protein | AQ505_RS00445 | Not Available | Positive | 128960 - 129469 | 18319.3 |
| ig-like domain-containing protein | AQ505_RS00450 | Not Available | Negative | 129503 - 130858 | 51629.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

