Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3820 family protein | AQ505_RS00355 | Not Available | Positive | 108943 - 109155 | 8233.31 |
| duf4302 domain-containing protein | AQ505_RS00360 | Not Available | Negative | 109269 - 110585 | 47679.6 |
| putative zinc-binding metallopeptidase | AQ505_RS00365 | Not Available | Negative | 110610 - 111998 | 51036.7 |
| ragb/susd family nutrient uptake outer membrane protein | AQ505_RS00370 | Not Available | Negative | 112017 - 113462 | 54156.2 |
| susc/raga family tonb-linked outer membrane protein | AQ505_RS00375 | Not Available | Negative | 113503 - 117123 | 133829.0 |
| fecr family protein | AQ505_RS00380 | Not Available | Negative | 117154 - 118131 | 37079.3 |
| hypothetical protein | AQ505_RS00385 | Not Available | Negative | 118201 - 118488 | 10283.2 |
| rna polymerase sigma-70 factor | AQ505_RS00390 | Not Available | Negative | 118571 - 119167 | 23422.3 |
| phosphatidate cytidylyltransferase | AQ505_RS00395 | Not Available | Negative | 119224 - 120033 | 30491.1 |
| duf2007 domain-containing protein | AQ505_RS00400 | Not Available | Negative | 120058 - 120267 | 7810.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

