Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i trna ligase family protein | AQ505_RS27120 | Not Available | Negative | 6142993 - 6144005 | 38720.8 |
| class i trna ligase family protein | AQ505_RS27125 | Not Available | Negative | 6143938 - 6144342 | 15655.5 |
| ld-carboxypeptidase | AQ505_RS27050 | Not Available | Positive | 6144438 - 6144848 | 14937.2 |
| hypothetical protein | AQ505_RS27055 | Not Available | Positive | 6144833 - 6145348 | 19009.6 |
| ragb/susd family nutrient uptake outer membrane protein | AQ505_RS26745 | Not Available | Negative | 6145489 - 6145884 | 14441.6 |
| hypothetical protein | AQ505_RS26750 | Not Available | Negative | 6145917 - 6146207 | 10211.1 |
| ragb/susd family nutrient uptake outer membrane protein | AQ505_RS26755 | Not Available | Negative | 6146200 - 6146856 | 23665.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

