Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | AQ505_RS00205 | Not Available | Positive | 79587 - 80816 | 46185.1 |
| peptide deformylase | AQ505_RS00210 | Not Available | Positive | 80835 - 81395 | 21544.1 |
| hypothetical protein | AQ505_RS00215 | Not Available | Negative | 81392 - 82030 | 23755.6 |
| nifu family protein | AQ505_RS00220 | Not Available | Negative | 82084 - 82329 | 8665.72 |
| mrp/nbp35 family atp-binding protein | AQ505_RS00225 | Not Available | Negative | 82366 - 83439 | 38141.5 |
| transglycosylase domain-containing protein | AQ505_RS00230 | Not Available | Positive | 83559 - 85730 | 81782.9 |
| hypoxanthine phosphoribosyltransferase | AQ505_RS00235 | Not Available | Positive | 85749 - 86306 | 20912.4 |
| phosphatidylserine decarboxylase family protein | AQ505_RS00240 | Not Available | Positive | 86356 - 87015 | 24937.3 |
| 50s ribosomal protein l19 | AQ505_RS00245 | Not Available | Negative | 88021 - 88368 | 13119.0 |
| hypothetical protein | AQ505_RS00250 | Not Available | Negative | 88589 - 88879 | 11002.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

