Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choice-of-anchor q domain-containing protein | AQ505_RS00155 | Not Available | Negative | 43513 - 63237 | 692327.0 |
| choice-of-anchor q domain-containing protein | AQ505_RS00160 | Not Available | Negative | 63249 - 68771 | 191980.0 |
| m3 family metallopeptidase | AQ505_RS00165 | Not Available | Negative | 69234 - 71360 | 79719.8 |
| hypothetical protein | AQ505_RS00170 | Not Available | Negative | 71490 - 72980 | 53646.6 |
| rna polymerase sigma factor | AQ505_RS00175 | Not Available | Negative | 73045 - 73614 | 21962.6 |
| duf4397 domain-containing protein | AQ505_RS00180 | Not Available | Negative | 73803 - 74522 | 25875.0 |
| molecular chaperone htpg | AQ505_RS00185 | Not Available | Negative | 74678 - 76561 | 70714.4 |
| duf2157 domain-containing protein | AQ505_RS00190 | Not Available | Positive | 76721 - 77704 | 37535.9 |
| hypothetical protein | AQ505_RS00195 | Not Available | Positive | 77701 - 78873 | 43770.3 |
| hmuy family protein | AQ505_RS00200 | Not Available | Positive | 78929 - 79432 | 18848.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

