Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | AQ505_RS00105 | Not Available | Positive | 31920 - 33260 | 49309.4 |
| yifb family mg chelatase-like aaa atpase | AQ505_RS00110 | Not Available | Positive | 33419 - 34960 | 55582.8 |
| hypothetical protein | AQ505_RS00115 | Not Available | Negative | 35096 - 35377 | 10878.2 |
| cog3014 family protein | AQ505_RS00120 | Not Available | Negative | 35417 - 36847 | 54042.4 |
| penicillin-binding protein activator lpob | AQ505_RS00125 | Not Available | Negative | 36873 - 37466 | 22068.5 |
| hypothetical protein | AQ505_RS00130 | Not Available | Negative | 37508 - 37921 | 16285.8 |
| tlpa disulfide reductase family protein | AQ505_RS00135 | Not Available | Negative | 38116 - 38709 | 21878.9 |
| s9 family peptidase | AQ505_RS00140 | Not Available | Positive | 38794 - 40944 | 81312.4 |
| tail fiber domain-containing protein | AQ505_RS00145 | Not Available | Negative | 41070 - 42071 | 36311.7 |
| hypothetical protein | AQ505_RS00150 | Not Available | Negative | 42098 - 43507 | 49104.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

