Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. PACM 27299 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822271 bp
Thymine Count
1833018 bp
Guanine Count
1247907 bp
Cytosine Count
1244094 bp
Genome Length
6147290 bp
Protein-coding Genes
5116 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility lipoprotein gldh | AQ505_RS00055 | Not Available | Negative | 23407 - 23844 | 16643.7 |
| class i trna ligase family protein | AQ505_RS00060 | Not Available | Negative | 24428 - 25570 | 43227.1 |
| hypothetical protein | AQ505_RS00065 | Not Available | Negative | 25573 - 26721 | 43759.6 |
| holliday junction resolvase ruvx | AQ505_RS00070 | Not Available | Positive | 26772 - 27185 | 15828.3 |
| o-methyltransferase | AQ505_RS00075 | Not Available | Positive | 27316 - 27951 | 23910.2 |
| glucosaminidase domain-containing protein | AQ505_RS00080 | Not Available | Positive | 27955 - 28638 | 26007.9 |
| glucosaminidase domain-containing protein | AQ505_RS00085 | Not Available | Positive | 28638 - 29549 | 34384.9 |
| hypothetical protein | AQ505_RS00090 | Not Available | Positive | 29657 - 30409 | 28619.7 |
| hypothetical protein | AQ505_RS00095 | Not Available | Positive | 30436 - 30741 | 12386.1 |
| duf3078 domain-containing protein | AQ505_RS00100 | Not Available | Positive | 30813 - 31835 | 38433.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

