Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase | PH7735_00899 | B8D1D7 | Positive | 938592 - 939725 | 42040.2 |
| hypothetical protein | PH7735_00900 | Not Available | Positive | 939786 - 940388 | 21303.3 |
| phthalate dioxygenase reductase | PH7735_00901 | P76254 | Positive | 940385 - 941335 | 34153.1 |
| hypothetical protein | PH7735_00902 | Not Available | Positive | 941348 - 942400 | 40381.6 |
| quaternary ammonium compound-resistance protein suge | PH7735_00903 | Q8D1E4 | Positive | 942407 - 942721 | 10909.0 |
| alkaline phosphatase 3 precursor | PH7735_00904 | P24823 | Positive | 942901 - 944385 | 52788.0 |
| hypothetical protein | PH7735_00905 | Not Available | Positive | 944458 - 944931 | 17728.3 |
| toluene efflux pump periplasmic linker protein ttga precursor | PH7735_00906 | Not Available | Positive | 945417 - 946763 | 47975.3 |
| putative efflux pump membrane transporter ttgb | PH7735_00907 | Not Available | Positive | 946756 - 949884 | 112585.0 |
| pca regulon regulatory protein | PH7735_00908 | Not Available | Positive | 950025 - 950819 | 28866.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
