Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00809 | Not Available | Negative | 837214 - 838374 | 42141.2 |
| hth-type transcriptional regulator mcbr | PH7735_00810 | Not Available | Positive | 838944 - 839606 | 24100.8 |
| anthranilate 1,2-dioxygenase large subunit | PH7735_00811 | D0C9N6 | Positive | 839791 - 840948 | 43888.8 |
| s-(hydroxymethyl)glutathione dehydrogenase | PH7735_00812 | P72324 | Negative | 841133 - 842044 | 32564.3 |
| various environmental stresses-induced protein | PH7735_00813 | A7MNV4 | Positive | 842360 - 842947 | 21075.4 |
| 8-oxoguanine deaminase | PH7735_00814 | Q9HU77 | Negative | 842908 - 844266 | 47992.9 |
| imidazolonepropionase | PH7735_00815 | Q5LRD9 | Positive | 844352 - 845563 | 42727.4 |
| histidine ammonia-lyase | PH7735_00816 | Q5LRD8 | Positive | 845560 - 847098 | 53598.7 |
| n-formylglutamate deformylase | PH7735_00817 | O31201 | Positive | 847095 - 847895 | 28737.7 |
| urocanate hydratase | PH7735_00818 | Q92V80 | Positive | 847892 - 849559 | 60791.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
