Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00799 | Not Available | Positive | 828127 - 828573 | 17490.1 |
| cyclolysin | PH7735_00800 | Not Available | Positive | 828767 - 832168 | 118875.0 |
| hypothetical protein | PH7735_00801 | Not Available | Negative | 832527 - 833015 | 17799.2 |
| hypothetical protein | PH7735_00802 | Not Available | Positive | 833303 - 833869 | 21246.1 |
| hypothetical protein | PH7735_00803 | Not Available | Negative | 834132 - 835745 | 60099.6 |
| hypothetical protein | PH7735_00804 | Not Available | Negative | 835745 - 836023 | 10411.4 |
| hypothetical protein | PH7735_00805 | Not Available | Negative | 836061 - 836153 | 3479.15 |
| hypothetical protein | PH7735_00806 | Not Available | Negative | 836150 - 836353 | 7206.46 |
| hypothetical protein | PH7735_00807 | Not Available | Negative | 836350 - 836595 | 8802.6 |
| hypothetical protein | PH7735_00808 | Not Available | Negative | 836675 - 837217 | 20011.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
