Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00759 | Not Available | Positive | 788537 - 788833 | 10493.7 |
| phoh-like protein | PH7735_00760 | P0A9K5 | Positive | 788982 - 790028 | 38352.4 |
| endoribonuclease ybey | PH7735_00761 | Q1GK93 | Positive | 790095 - 790598 | 18251.3 |
| hemolysin c | PH7735_00762 | Q92GI2 | Positive | 790630 - 791514 | 31884.9 |
| apolipoprotein n-acyltransferase | PH7735_00763 | P61036 | Positive | 791507 - 792997 | 52849.6 |
| s-adenosylmethionine synthase | PH7735_00764 | Q5LLL2 | Positive | 793084 - 794265 | 42321.7 |
| bile acid transporter | PH7735_00765 | Not Available | Positive | 794376 - 795236 | 29148.0 |
| trna (guanine-n(7)-)-methyltransferase | PH7735_00766 | Q1GK88 | Positive | 795288 - 796001 | 27157.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | PH7735_00767 | Q161H2 | Positive | 796147 - 797499 | 47003.3 |
| hypothetical protein | PH7735_00768 | Not Available | Positive | 797496 - 798029 | 19431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
