Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylformamidase | PH7735_00039 | Not Available | Negative | 54097 - 54933 | 31264.7 |
| solvent efflux pump srpabc operon corepressor | PH7735_00040 | Q9R9U0 | Positive | 55246 - 55905 | 23930.5 |
| mycofactocin system transcriptional regulator | PH7735_00041 | Not Available | Negative | 55985 - 56578 | 21778.9 |
| toluene efflux pump periplasmic linker protein ttga precursor | PH7735_00042 | Not Available | Positive | 56655 - 57836 | 41535.3 |
| acriflavine resistance protein b | PH7735_00043 | P31224 | Positive | 57896 - 60946 | 108701.0 |
| toluene efflux pump outer membrane protein ttgi precursor | PH7735_00044 | P15727 | Positive | 60943 - 62301 | 47846.2 |
| hypothetical protein | PH7735_00045 | Not Available | Negative | 62405 - 63130 | 25774.6 |
| multiple antibiotic resistance protein marr | PH7735_00046 | Not Available | Positive | 63415 - 63852 | 15941.7 |
| adenylate cyclase 2 | PH7735_00047 | P9WQ31 | Negative | 63959 - 65548 | 57984.2 |
| hypothetical protein | PH7735_00048 | Not Available | Negative | 65652 - 66356 | 25476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
