Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier-protein] reductase | PH7735_00749 | P58381 | Negative | 778551 - 779339 | 28039.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 1 | PH7735_00750 | P43710 | Negative | 779527 - 780756 | 42475.4 |
| hypothetical protein | PH7735_00751 | Not Available | Negative | 780919 - 781323 | 14073.7 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | PH7735_00752 | B9JGS3 | Negative | 781555 - 782061 | 18533.7 |
| peroxide-responsive repressor perr | PH7735_00753 | Not Available | Positive | 782235 - 782651 | 15402.2 |
| alcohol dehydrogenase | PH7735_00754 | Q4J781 | Positive | 782812 - 783798 | 33564.2 |
| putative cardiolipin synthase ywie | PH7735_00755 | P75919 | Negative | 783795 - 785330 | 57345.0 |
| hypothetical protein | PH7735_00756 | Not Available | Negative | 785321 - 786190 | 33662.9 |
| (dimethylallyl)adenosine trna methylthiotransferase miab | PH7735_00757 | Q1GK98 | Positive | 786302 - 787624 | 49347.1 |
| inner membrane lipoprotein yiad precursor | PH7735_00758 | Not Available | Positive | 787949 - 788524 | 20870.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
