Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkane 1-monooxygenase 2 | PH7735_00609 | Not Available | Negative | 635292 - 636326 | 38144.5 |
| nadp-reducing hydrogenase subunit hndc | PH7735_00610 | P56913 | Positive | 636506 - 638194 | 61247.2 |
| yhhn-like protein | PH7735_00611 | Not Available | Positive | 638371 - 639051 | 24134.2 |
| signal recognition particle receptor ftsy | PH7735_00612 | A9CHH2 | Positive | 639096 - 640322 | 42982.1 |
| phosphonate utilization associated putative membrane protein | PH7735_00613 | Not Available | Positive | 640429 - 641331 | 32544.7 |
| intracellular septation protein | PH7735_00614 | C0RFI0 | Positive | 641380 - 641985 | 22857.8 |
| disulfide-bond oxidoreductase yfcg | PH7735_00615 | P77526 | Negative | 642094 - 642789 | 26239.1 |
| hypothetical protein | PH7735_00616 | Not Available | Negative | 642813 - 643748 | 34432.3 |
| o-succinylhomoserine sulfhydrylase | PH7735_00617 | P9WGB4 | Positive | 644002 - 645183 | 42334.6 |
| gtp cyclohydrolase fole2 | PH7735_00618 | Q5LTR1 | Positive | 645485 - 646585 | 41104.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
