Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00589 | Not Available | Negative | 617625 - 617804 | 6082.21 |
| soluble lytic murein transglycosylase precursor | PH7735_00590 | Not Available | Positive | 618110 - 618976 | 30440.9 |
| l-serine dehydratase 2 | PH7735_00591 | O86564 | Negative | 618990 - 620363 | 47734.9 |
| glutathione s-transferase gst-6.0 | PH7735_00592 | Not Available | Negative | 620364 - 621071 | 25980.1 |
| hypothetical protein | PH7735_00593 | Not Available | Negative | 621219 - 621674 | 16446.8 |
| putative hth-type transcriptional regulator/gbaa_1941/bas1801 | PH7735_00594 | Not Available | Positive | 621750 - 622181 | 16056.6 |
| ribose-5-phosphate isomerase a | PH7735_00595 | Q5LTT5 | Positive | 622266 - 623054 | 28061.6 |
| glutathione amide reductase | PH7735_00596 | P48639 | Positive | 623064 - 624419 | 48948.7 |
| modulator of ftsh protease hflk | PH7735_00597 | P0ABC8 | Positive | 624487 - 625650 | 40882.7 |
| modulator of ftsh protease hflc | PH7735_00598 | P44545 | Positive | 625647 - 626516 | 32286.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
