Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine import atp-binding protein pota | PH7735_00019 | Q8U6M1 | Negative | 34762 - 35811 | 38100.4 |
| putative 2-aminoethylphosphonate transport system permease protein phnv | PH7735_00020 | Not Available | Negative | 35799 - 37502 | 60556.4 |
| iron uptake protein a1 precursor | PH7735_00021 | P44731 | Negative | 37502 - 38470 | 34106.2 |
| hypothetical protein | PH7735_00022 | Not Available | Positive | 39091 - 39384 | 11447.2 |
| hypothetical protein | PH7735_00023 | Not Available | Positive | 39654 - 40184 | 20280.1 |
| hypothetical protein | PH7735_00024 | Not Available | Positive | 40225 - 40539 | 11119.4 |
| choline-sulfatase | PH7735_00025 | Not Available | Negative | 40659 - 42170 | 57002.2 |
| glycine betaine/l-proline transport system permease protein prow | PH7735_00026 | P14176 | Negative | 42177 - 43094 | 33160.9 |
| glycine betaine transport atp-binding protein opuaa | PH7735_00027 | Q9KIF7 | Negative | 43106 - 44125 | 37485.2 |
| glycine betaine-binding periplasmic protein precursor | PH7735_00028 | E0SCY3 | Negative | 44191 - 45147 | 34412.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
