Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab family protein | PH7735_00529 | Not Available | Negative | 560907 - 561908 | 36496.6 |
| hypothetical protein | PH7735_00530 | Not Available | Positive | 562029 - 562697 | 24772.8 |
| voltage-gated potassium channel kch | PH7735_00531 | Not Available | Positive | 562701 - 563474 | 28730.7 |
| sulfotransferase family protein | PH7735_00532 | Not Available | Positive | 563537 - 564187 | 25599.3 |
| co-chaperonin groes | PH7735_00533 | A8LJQ0 | Positive | 564333 - 564620 | 10179.2 |
| stress protein h5 | PH7735_00534 | Q1GJ36 | Positive | 564663 - 566312 | 57709.5 |
| carboxylate/amino acid/amine transporter | PH7735_00535 | P29370 | Positive | 566453 - 567286 | 28779.0 |
| putative acetyltransferase | PH7735_00536 | Not Available | Positive | 567323 - 567790 | 16676.3 |
| pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase | PH7735_00537 | Not Available | Negative | 567787 - 568236 | 16842.0 |
| alpha/beta hydrolase family protein | PH7735_00538 | Not Available | Positive | 568303 - 569022 | 26261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
