Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00449 | Not Available | Negative | 477844 - 478596 | 24977.8 |
| hypothetical protein | PH7735_00450 | Not Available | Negative | 478714 - 478875 | 5404.9 |
| hypothetical protein | PH7735_00451 | Not Available | Negative | 478872 - 479084 | 7465.2 |
| ribulose-phosphate 3-epimerase | PH7735_00452 | P51012 | Positive | 479340 - 480029 | 24219.1 |
| hypothetical protein | PH7735_00453 | Not Available | Positive | 480234 - 480557 | 11483.1 |
| bacterial sh3 domain protein | PH7735_00454 | Not Available | Negative | 480634 - 481152 | 19089.1 |
| glycerate dehydrogenase | PH7735_00455 | Q9C4M5 | Positive | 481260 - 482246 | 36317.4 |
| hypothetical protein | PH7735_00456 | Not Available | Negative | 482188 - 482388 | 7017.27 |
| gamma-glutamyltranspeptidase precursor | PH7735_00457 | P54422 | Positive | 482416 - 484188 | 62799.7 |
| putative fad-linked oxidoreductase | PH7735_00458 | Q7TNG8 | Positive | 484248 - 485651 | 49700.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
