Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-import protein phnd precursor | PH7735_00419 | P16682 | Positive | 450558 - 451460 | 31859.0 |
| phosphate-import permease protein phne | PH7735_00420 | O69053 | Positive | 451528 - 452406 | 32243.2 |
| phosphate-import permease protein phne | PH7735_00421 | A0A140NFA3 | Positive | 452403 - 453725 | 49072.1 |
| chloramphenicol acetyltransferase | PH7735_00422 | P26841 | Positive | 453822 - 454439 | 22768.8 |
| hypothetical protein | PH7735_00423 | Not Available | Negative | 454444 - 454845 | 14899.8 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | PH7735_00424 | Not Available | Negative | 454906 - 456087 | 43021.3 |
| putative transcriptional regulator phnf | PH7735_00425 | P44487 | Negative | 456175 - 456906 | 26390.4 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phng | PH7735_00426 | Q52984 | Positive | 457008 - 457454 | 16039.5 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh | PH7735_00427 | Not Available | Positive | 457451 - 458020 | 20017.0 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | PH7735_00428 | Q52986 | Positive | 458020 - 459105 | 40154.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
