Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | PH7735_00379 | Q160Y3 | Positive | 409713 - 411830 | 77697.7 |
| elongation factor tu | PH7735_00380 | Q1GDV0 | Positive | 411897 - 413072 | 42825.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PH7735_00381 | Not Available | Negative | 413257 - 414030 | 28612.1 |
| hypothetical protein | PH7735_00382 | Not Available | Positive | 414367 - 414621 | 8780.48 |
| hypothetical protein | PH7735_00383 | Q5LLU5 | Positive | 414771 - 415079 | 11533.1 |
| 50s ribosomal protein l3 | PH7735_00384 | Q5LLU6 | Positive | 415095 - 415820 | 25297.6 |
| hypothetical protein | PH7735_00385 | Q16AF3 | Positive | 415817 - 416434 | 22183.0 |
| 50s ribosomal protein l23 | PH7735_00386 | Q1GK35 | Positive | 416431 - 416727 | 10709.1 |
| fatty acid desaturase | PH7735_00387 | Not Available | Positive | 417307 - 418341 | 39689.8 |
| hypothetical protein | PH7735_00388 | Not Available | Positive | 418606 - 419565 | 34808.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
