Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endoribonuclease l-psp | PH7735_04009 | Not Available | Positive | 4256322 - 4256783 | 15787.2 |
| glycerophosphoryl diester phosphodiesterase | PH7735_04010 | Not Available | Positive | 4256786 - 4257547 | 27270.3 |
| putative protein involved in methicillin resistance | PH7735_04011 | Not Available | Positive | 4257599 - 4258786 | 44576.3 |
| putative pterin-4-alpha-carbinolamine dehydratase | PH7735_04012 | Q5LM31 | Positive | 4258783 - 4259073 | 10922.1 |
| molybdenum cofactor biosynthesis protein moac/mosc-domain-containing protein | PH7735_04013 | Not Available | Positive | 4259202 - 4259675 | 17322.8 |
| putative peroxiredoxin | PH7735_04014 | Q9FR35 | Negative | 4259806 - 4260294 | 17055.6 |
| ferredoxin--nad(p)(+) reductase fdr | PH7735_04015 | X5CY81 | Positive | 4260381 - 4261589 | 43304.8 |
| ribosomal rna small subunit methyltransferase d | PH7735_04016 | O34331 | Positive | 4261586 - 4262146 | 19701.4 |
| putative integral membrane protein | PH7735_04017 | Not Available | Positive | 4262305 - 4263165 | 30355.0 |
| trap transporter solute receptor, dctp family | PH7735_04018 | Not Available | Negative | 4263234 - 4264280 | 37494.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
