Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoacetaldehyde acetyltransferase | PH7735_03989 | A3SR25 | Negative | 4232745 - 4234520 | 63586.0 |
| hth-type transcriptional regulatory protein gabr | PH7735_03990 | D5AKX9 | Negative | 4234739 - 4236193 | 54383.2 |
| putative ribosomal n-acetyltransferase ydaf | PH7735_03991 | Not Available | Negative | 4236251 - 4236847 | 22126.7 |
| taurine--pyruvate aminotransferase | PH7735_03992 | A1B9Z3 | Negative | 4236949 - 4238349 | 51147.1 |
| sulfate starvation-induced protein 1 | PH7735_03993 | Not Available | Positive | 4238756 - 4239757 | 34385.0 |
| taurine import atp-binding protein taub | PH7735_03994 | Q16BJ3 | Positive | 4239788 - 4240690 | 33378.0 |
| putative aliphatic sulfonates transport permease protein ssuc | PH7735_03995 | Q47539 | Positive | 4240692 - 4242029 | 48214.3 |
| transcriptional activator protein luxr | PH7735_03996 | Not Available | Negative | 4242079 - 4242849 | 28683.2 |
| ssra-binding protein | PH7735_03997 | Q5LLW5 | Positive | 4243006 - 4243482 | 18258.0 |
| 3-mercaptopyruvate sulfurtransferase | PH7735_03998 | O64530 | Positive | 4243684 - 4244541 | 31514.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
