Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| modification methylase foki | PH7735_00359 | P35516 | Positive | 386920 - 387942 | 37881.1 |
| hypothetical protein | PH7735_00360 | Not Available | Positive | 387945 - 388502 | 19917.4 |
| 5-methylcytosine-specific restriction enzyme b | PH7735_00361 | P15005 | Positive | 388510 - 389682 | 43802.1 |
| 5-methylcytosine-specific restriction enzyme subunit mcrc | PH7735_00362 | Not Available | Positive | 389745 - 390950 | 44516.8 |
| hypothetical protein | PH7735_00363 | Not Available | Negative | 391074 - 391289 | 7831.13 |
| hypothetical protein | PH7735_00364 | Not Available | Negative | 391326 - 392141 | 29905.7 |
| hypothetical protein | PH7735_00365 | Not Available | Negative | 392486 - 393307 | 31488.8 |
| hypothetical protein | PH7735_00366 | Not Available | Positive | 393823 - 394290 | 17275.0 |
| preprotein translocase subunit sece | PH7735_00367 | Not Available | Positive | 394436 - 394633 | 7303.32 |
| hypothetical protein | PH7735_00368 | Q9KV35 | Positive | 394884 - 395534 | 24043.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
