Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00001 | Not Available | Negative | 12 - 1676 | 60197.6 |
| 23s ribosomal rna (partial) | Not Available | Not Available | Positive | 1745 - 3222 | 18.01 |
| site-specific tyrosine recombinase xerc | PH7735_00002 | Not Available | Negative | 1673 - 2785 | 41647.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4203 - 5680 | Not Available |
| site-specific tyrosine recombinase xerc | PH7735_00003 | Not Available | Negative | 2782 - 4455 | 63497.9 |
| dna binding domain, excisionase family | PH7735_00004 | Not Available | Negative | 4572 - 4784 | 8351.12 |
| hypothetical protein | PH7735_00005 | Not Available | Negative | 4781 - 4963 | 6563.61 |
| hypothetical protein | PH7735_00006 | Not Available | Negative | 5048 - 5803 | 28636.1 |
| outer membrane protein ii* | PH7735_00007 | Not Available | Negative | 6221 - 6913 | 24914.8 |
| outer membrane efflux protein bepc precursor | PH7735_00008 | Not Available | Positive | 7074 - 8486 | 52713.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
