Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-responsive regulatory protein | PH7735_03969 | Not Available | Positive | 4212468 - 4212932 | 17278.7 |
| l-aminopeptidase/d-esterase | PH7735_03970 | P9WM22 | Negative | 4212929 - 4213915 | 33014.1 |
| creatinase | PH7735_03971 | P19213 | Positive | 4214204 - 4215448 | 45812.0 |
| inosamine-phosphate amidinotransferase 1 | PH7735_03972 | Q2HJ74 | Negative | 4215504 - 4216625 | 43521.1 |
| hypothetical protein | PH7735_03973 | Not Available | Negative | 4216849 - 4217190 | 12855.0 |
| general stress protein 17o | PH7735_03974 | P0A0V4 | Negative | 4217257 - 4217682 | 14347.0 |
| organic hydroperoxide resistance transcriptional regulator | PH7735_03975 | O34777 | Positive | 4217801 - 4218244 | 16377.9 |
| hypothetical protein | PH7735_03976 | Not Available | Positive | 4218406 - 4219482 | 40198.6 |
| hypothetical protein | PH7735_03977 | Not Available | Positive | 4219794 - 4220918 | 43026.3 |
| hypothetical protein | PH7735_03978 | Not Available | Positive | 4220965 - 4221303 | 12010.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
